Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927926.1_cds_XP_016475610.1_67524
CDS Infomation

[gene=LOC107797252] [db_xref=GeneID:107797252] [protein=zinc finger MYM-type protein 1-like] [protein_id=XP_016475610.1] [location=join(120598..120818,123041..124346)] [gbkey=CDS]
Sequence

ATGTATCCTGATATTTTTTTCATAAATCAGCAGCAGAAGGCCACTATCTATGATGTTTGG
TCAGCTCAAGGATGGAATCTCACTTATAGAAGATTTTTGAATGATTGGGAGATCACTAGA
ATCACAGACTTCTACAACACACTCAATCATTTTACAGGGGTGAATCTGAATGCTGGTGAG
GCATGGTGGCTGAGGCACAGTCTGTTAAATCTTCTTATCAGTGATACATCGGCATGCTCA
TTGAAGGAAGCAATCTACTCTTTGCTTTCGGACCACTTACTAAGTCCGTCTCAAATACGT
GGACAAGGTTATGATGGAGCTAGTAACATGAGGGGAGAGATAAGTGGGCTTAAGACTTTG
ATTATGAAAAACAGCTCATCGGCATATTACATACATTGTTTTGCTCATCAATTGCAATTA
ACACTTGTAGCTATGTCTAAAAAATATTTGGATGTCGAAGACTTCTTTTGTCATGTTACT
AATGTATTGAATGTCATTGGAGTATCTTTTAAGCGCAGAGATTTGCTTCGCCATCTTCAA
GCTGAAAAACTGGAGCAATTACTTGAGTCCAGTGAAATTCAGACCGGGCGAGGACTAAAT
CAAGAACGCGGGCTTCAAAGACCAGGTGATACTCGTTGGGGATCATATTTCAAAACATTA
GATAACGTTATTGTTATTTTCTCATCTATTATTCGTGTACTTGAAGTGATTGAACATGAA
CGTTCCACCTCAAATGAGAGAAATCAAGCAAAATATCTTTTGAGTGAGATAATAACATTC
AAATTTGTTTTTATGCTTCACTTGATGTTGAAAGTTTTGGTAATGTCAAATGAGTTGAAC
AAGATCCTACAAAAGAGAGATCAAGATATTGTTAATGCCGTGGAGTTTCTTAATATTAAA
AAGAAAAGATTGCAAGATATGAGGGAAACTGGATGGGAATCTTTGCTAGATGATGTTTTC
TCATTTTGTCATATGCATGATATTATGATTCCCAAGATGGATGAATCCTATTTTCCTGAA
AAGTCGAAGCGTAAGTCTTCTGGTATTTGTTATTCACACCACTTGTGTGTTGATATCTTT
TATGTTGTAATTGATGTGCAACTTCAAGAGCTTAATGACCGTTTTGATGTAGTGAGTAGC
GATTTGCTTCTTAGGATGGCTAGTTTGAATTCAGCCAATTCTTTTGCTAATTTTGATAAA
GGTAGAATAATGACTTTAGCAAAATGTTACCCAAATGAGTTTGATGAAGTACACATTCGA
GACTTGAGTTATCAACTAGATACTTTCATAATTCATATGCGAGTTGGCAATCCCAAGTTC
TCCAACTTGCAAGGAATTAGTGATTTGGCAAAAGCATTGGTTGAGACAAATCTTGTGGAG
ACTAATTCGTATGTTTATTTACTTGTGAAGTTAACTCTGATTTTACATGTTGCTACCGCA
ACTGTGGAGAGAGCATTCTCATCCATGAAGCAGATAAAGAATGAAGAGAGGAACAACATG
GNGTTTAATTTATTACATAGAGCGTGA

Peptide Sequence

PEP ID

XP_016475610.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like [Nicotiana tabacum]
Sequence

MYPDIFFINQQQKATIYDVWSAQGWNLTYRRFLNDWEITRITDFYNTLNHFTGVNLNAGE
AWWLRHSLLNLLISDTSACSLKEAIYSLLSDHLLSPSQIRGQGYDGASNMRGEISGLKTL
IMKNSSSAYYIHCFAHQLQLTLVAMSKKYLDVEDFFCHVTNVLNVIGVSFKRRDLLRHLQ
AEKLEQLLESSEIQTGRGLNQERGLQRPGDTRWGSYFKTLDNVIVIFSSIIRVLEVIEHE
RSTSNERNQAKYLLSEIITFKFVFMLHLMLKVLVMSNELNKILQKRDQDIVNAVEFLNIK
KKRLQDMRETGWESLLDDVFSFCHMHDIMIPKMDESYFPEKSKRKSSGICYSHHLCVDIF
YVVIDVQLQELNDRFDVVSSDLLLRMASLNSANSFANFDKGRIMTLAKCYPNEFDEVHIR
DLSYQLDTFIIHMRVGNPKFSNLQGISDLAKALVETNLVETNSYVYLLVKLTLILHVATA
TVERAFSSMKQIKNEERNNMXFNLLHRA

Transcript Sequence

Gene sequence data has not been registered.